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Theoretical investigation of optical patterning of monolayers with subwavelength resolution Triet Nguyen, Michael Mansell, Alex Small ∗ Physics Department, California State Polytechnic University, Pomona, CA 91768, United States

a r t i c l e

i n f o

Article history: Received 21 December 2009 Received in revised form 31 March 2010 Accepted 15 April 2010 Available online xxxx Communicated by R. Wu Keywords: Photolithography Superresolution Monolayers

a b s t r a c t We formulate a model of monolayer patterning via optically-controlled chemical reactions, with the goal of beating the diffraction limit in photolithography. We consider the use of the proven technique of STimulated Emission Depletion (STED) to selectively place a handful of molecules in a reactive excited state. We show that repeated optical excitation has a greater effect on pattern formation than increasing the reaction rate, auguring well for experimental work. We also consider optically-controlled deposition of a soluble species via STED, and show that even for very large concentrations and excited state lifetimes the full width at half maximum of the features formed is robust against the effects of diffusion and saturation. © 2010 Elsevier B.V. All rights reserved.

1. Introduction Due to diffraction, spatial resolution in photolithography has long been limited to approximately half the wavelength of the light used to initiate the chemical reaction in the photoresist. A variety of techniques have been proposed to overcome this limit and optically write patterns onto surfaces with subwavelength resolution, including schemes based on multi-photon absorption [1], coherent control of transitions within the photoresist molecules (via coherent population trapping) [2], and negative index materials [3]. However, achieving very high resolution in a multi-photon absorption scheme generally requires a reaction that only occurs after the simultaneous absorption of a large number of photons, making it difficult to realize resolutions significantly better than λ/4. Formation of patterns with subwavelength resolution via coherent control of transitions has only been realized in atomic vapors [4], which will not be suitable for most surface-patterning applications. Negative index materials hold the promise for potentially unlimited resolution, but are still in their early stages of development. Here we propose to take advantage of STimulated Emission Depletion (STED), a technique that has been demonstrated to achieve λ/20 or better resolution in fluorescence microscopy [5,6]. The basic idea of STED is to first focus a pulse of light to a conventional diffraction-limited spot of size ≈ λ/2, and use it to raise the molecules to an excited state. That pulse of light is then im-

*

Corresponding author. E-mail address: [email protected] (A. Small). URL: http://sites.google.com/site/physicistatlarge (A. Small).

mediately followed by a second pulse with a “doughnut” profile (i.e. a superposition of TEM10 and TEM01 modes) that has a node in the radial center of the intensity profile. The second pulse is tuned to the frequency of the downward transition, causing all of the molecules except those at the very center (where the intensity is zero) to undergo stimulated emission and return to the ground state. The result is that excitation is confined to a region with a radius at least an order of magnitude smaller than λ. When used for imaging, STED enables sub-wavelength resolution due to the fact that any photons emitted by the molecules after the second pulse must be from molecules near the node of the depletion pulse. What we will study here is the feasibility of using the STED concept to control photochemistry, by taking advantage of the fact that excited states are often reactive. The concept was first proposed in 2004 by Hell [7], assuming a reactive ground state. We will assume a reactive excited state, since such a reaction is easier to turn “off” and thereby control. We also consider the effects of diffusion in this work. Recently, several groups have used the STED concept to achieve subwavelength resolution in photolithography, either by controlling photoinitiators [8,9] or by rendering a nanoscale region of a photochromic material transparent, and using it as a mask for lithography [10]. These promising results prompt us to ask if we can approach single-molecule resolution in surface patterning via the STED concept, and produce patterned monolayers. One promising finding from our work is that (unlike in the photoinitiator approach) even a very weakly reactive species can be used to achieve subwavelength patterning of surfaces, if the exposure conditions are properly controlled. We will consider two models of optically-controlled monolayer formation. In the first (Fig. 1), the photoreactive species is surface-bound, and excitation either causes the excited surface-

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Fig. 2. Energy levels and transition rates for our photoactivated species. We assume that the rate of spontaneous radiative transitions from |3 to |1 is negligible compared with driven upward and downward transitions (with rates I e σe ) and vibrational transitions from |3 to |2 (with rate τ v−1 ). Fig. 1. Outline of the process. (a) A focused Gaussian beam of size ≈ λ raises molecules to the excited state. (b) A subsequent depletion beam with a node at the center of its intensity profiles sends most of the molecules back to the ground state, except those near the node. (c) Molecules remaining in the excited state either detach from the surface or bind a species in solution, modifying the local surface properties. This continues until eventual relaxation to the ground state.

bound molecules to dissociate (with a rate constant k) or attach to a species in solution. An example of the dissociation scenario is rhodopsin, which undergoes a dissociation reaction in its excited state [11,12]. An example of the attachment scenario is derivatives of azobenzene, which undergoes a photocontrollable cis–trans isomerization and can be functionalized to attach to soluble species in one isomer or the other [13,14]. This model is also formally equivalent to one in which surface-bound excited species bind to a species present in solution, if the soluble species are present in excess (i.e. initial binding events do not reduce the local concentration enough to significantly reduce the rate of subsequent binding events). However, this model is only equivalent to a system of photoreactive molecules in solution that can attach to a surface if during the excited state lifetime τ they diffuse a distance much less than λ. Since the diffusion coefficient for typical small organics in liquids at room temperature is of order 10−9 m2 /s [15], if STED initially confines the excited species to a region of size 10 nanometers (10−8 m) then the excited state lifetime would have to be no larger than 10−7 seconds for this model to be applicable. The second model then explores the effect of a long-lived excited state in a diffusible and photoreactive species. In this model, we assume that a population of excited molecules is created in solution with a Gaussian profile, and model the attachment of excited molecules to the surface. We will show that getting a significant number of molecules to attach to a surface in a single activation cycle is a challenge for realistic reaction rates and concentrations, but that the width of the surface concentration profile is robust against the effects diffusion and saturation. 2. Photoactivation of surface-bound species

we approximate its intensity profile at the surface as a Gaussian of the form: 2 2 I e (r ) = I 1 e −k1 r /2

where r is the radial distance from the origin, I 1 is the intensity (units of photons per area per time) at the center of the beam, and k1 is the wavenumber (in the surrounding medium) of the excitation beam. We will assume that our molecules have 3 energy levels, as shown in Fig. 2. The reactive state is assumed to be |2. In reality, the two excited states shown will be part of a larger set of singlet excited states coupled by vibrational transitions, but the scheme in Fig. 2 suffices for our purposes. We assume optical excitation from the ground state |1 to the highest state |3, and that the rate of spontaneous radiative transitions from |3 to |1 is negligible compared to the rate τ v−1 for vibrational transitions from |3 to |2. For organic fluorophores, τ v is often of order 10−11 to 10−13 seconds, while the radiative lifetime of the excited state is typically of order nanoseconds or longer [16]. In the steady state, the kinetic equations describing the populations of these states are:

d dt d dt d

N 1 = σe I e ( N 3 − N 1 ) + N 2 /τ = 0

(2)

N 2 = N 3 /τ v − N 2 /τ = 0

(3)

N 3 = σe I e ( N 1 − N 3 ) − N 3 /τ v = 0 dt N1 + N2 + N3 = 1

(4) (5)

where N 1 , N 2 , and N 3 are the fraction of molecules in the 3 energy levels. We assume that the pulse duration is shorter than the time scale for reactions, so the fraction of sites occupied by excited molecules (in state |2) immediately after the excitation pulse can be found from solutions to the kinetic equations (3)–(5):

φe (r ) = φ g ,i

2.1. Model

≡ φ g ,i In modeling surface-bound photoactivated molecules, we will assume (for simplicity) that surface-bound molecules are initially present on a surface with some concentration c i (r) (which will typically start out uniform). For convenience, we will write the concentration as c (r) ≡ c sat φ(r) where c sat is the density of sites available on the surface and φ is the fraction of sites occupied. We will calculate the fraction of sites occupied by molecules in the ground and excited states, denoted φ g and φe . We assume that the molecules are first raised to the excited state by a pulsed excitation beam tuned to the absorption maximum of the ground state, and

(1)

σe τ I e (r ) 1 + σe I e (r )(τ + 2τ v ) I e (r )

1+

I  (r )(1 + 2τ e

v/

τ)

(6)

where φ g ,i is the fraction of sites occupied by molecules in the grounds state before excitation, σe is the absorption cross section of the ground state at the frequency of the excitation beam, and τ is the radiative lifetime of the excited state. We are assuming that the time intervals between excitation events are long compared to the excited state lifetime. The last term in the denominator will hereafter be neglected, because the lifetime of vibrational transitions is generally at least an order of magnitude smaller than the lifetime of radiative transitions.

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The subsequent depletion pulse that returns molecules to the ground state via stimulated emission is approximated with a spatial profile of the form: 2 2 I d (r ) = I 2 k22 r 2 e −k2 r /2

(7)

where I 2 also has units of photons per area per time and k2 is again the wavenumber (in the surrounding medium) of the depletion pulse. If the pulse duration t (as well as the time elapsed between the end of the excitation pulse and the beginning of the second pulse) is significantly shorter than the lifetime of the excited state, then the concentration of molecules in the excited state after the STED beam is:

φe (r ) = φ g ,i ≡ φ g ,i

I  (r ) e

1 + I e (r )

e −σs I d (r )t

I e (r )

1+

e I  (r )

− I d

(8)

e

where σs is the stimulated emission cross-section of the excited state, I e = σe τ I e , and I d = σs I d t. For large I 2 , after the sequence of pulses the excitation is confined to a region close to the origin, where I d ≈ 0 because of its r 2 dependence. If I 2 is small then φe (r ) is a bell-shaped curve √ with the usual width for STED microscopy, ≈ λ/ 1 + I 2 σ τ (assuming that the wavelengths of the two pulses are similar, as is usually the case). If, however, I e ∼ 0.1 or greater (i.e. the rate of excitation begins to approach the same order of magnitude as the rate of spontaneous emission, a necessary condition for bringing a large fraction of the surface-bound molecules into the reactive excited state in each cycle) then I e /(1 + I e ) begins to saturate and the resolution changes. We can work out the relationship between resolution and excitation intensity by expanding Eq. (8) near the origin to second order in r. The result is:

φe (r )/φ g ,i ≈

I

1

1 + I 1



1−

r

2

2

k21

  2 2 2 + 2I 1 I 2 k2 1 + I

+ 2I  k2

(9)

1

where I 1 = I 1 σe τ and I 2 = I 2 σs t. The first two terms in the numerator of the coefficient of r 2 are familiar from traditional STED microscopy. The I 1 in the denominator and the other numerator term, however, occur because at high excitation intensity the upward transition saturates, and the concentration profile of excited molecules after the excitation pulse is wider than λ. When using STED for imaging, the excitation power may be low to avoid photobleaching, and these terms will not matter. However, if using STED to pattern a surface, from a time/efficiency perspective it is usually desirable to raise a very large fraction of the molecules (in the vicinity of a given site) to the excited state. The result of all these effects gives the following scaling for the width r of the concentration profile of excited molecules:

λ

r ∝ 

2I 

2

+

(10)

1 1+ I 1

Note that we have assumed that the upward and downward transitions are close in energy, so k1 ≈ k2 and hence the value of λ is approximately the same for both beams. When this approximation is not valid, the equations can still be made to take this form by making minor rescaling adjustments to the intensity I 2 in Eq. (9). The last term in the denominator is never larger than 1, while I 2 1 in most STED experiments, and so the dependence of reso-



lution on the intensity of the depletion beam is ∼ λ/ I 2 . The last term in the denominator would only matter in a situation where I 2 is small and I 1 is large. In that case, due to the high excitation intensity even those molecules much more than λ away from the center would be raised to the excited state by the intense tail

3

of the excitation beam, and very few of them would return to the ground state, reducing the resolution of the patterning approach. In what follows, we use the spatial profile given in Eq. (8) as the initial condition for φe (r , t ) and φ g ,i − φe (r , t = 0) as the initial condition for φ g (r , t ). These concentration profiles obey the following equations:

d dt d dt

φe = −φe /τ − kd φe − kb φe

(11)

φ g = φe /τ

(12)

where kd is the (first order) rate constant for dissociation from the surface, kb is the rate at which excited molecules photobleach, and φe /τ is the spontaneous emission rate. Solving these coupled linear equations gives the following result for the number of molecules in the ground state and attached to the surface at t τ (i.e. after all of the molecules still attached have returned to the ground state):

φ g (r )/φ g ,i = 1 −

I e (r ) 1+

e I  (r ) e

−σs I d (r )t

(kd + kb )τ 1 + (kd + kb )τ

(13)

Since bleaching and dissociation rates always enter this model additively, there is no need to vary these parameters separately to understand the behavior of the model. From a practical standpoint, however, it is desirable to have kd kb . For the remainder of this work, we will only treat the case kb = 0. If kb = 0, the ratio of dissociated to bleached molecules can be calculated from the ratio kd /kb . 2.2. Key results for photodissociation of surface-bound molecules Eq. (13) can be used to calculate the number of molecules attached to the surface after illumination by excitation and depletion pulses of arbitrary beam profile, not just the profiles in Eq. (1) and Eq. (7). For illumination by a series of alternating excitation and depletion pulses, φ g ,i is whatever the local concentration was after the previous exposure. We assumed simultaneous illumination by several pulses of the forms in Eq. (1) and Eq. (7), centered at different locations and (possibly) having different intensities. We calculated the local concentration after the exposures, and then repeated the calculations for a new set of beams. All calculations were performed in Matlab. For validation of the code, we also implemented a discrete model, where arrays of molecules with λ/500 spacing were simulated. A molecule’s probability of dissociating from the surface is equal to the right-hand side of Eq. (13) and is assumed to be unaffected by the status of its neighbors. At the end of each simulation, a site was either occupied or unoccupied. By running many simulations, counting the number of times that a molecule dissociated from a site, and dividing by the number of simulations run, we obtained average concentration profiles. Many stochastic simulations were performed and averaged, and the results were compared with calculations from the concentration model of Eq. (13) to validate the code. Because the stochastic simulations and the direct calculations from Eq. (13) both use the same probability model, it is not surprising that they gave the same results. We only used the stochastic simulations as a check on our code. All results reported here will be based on direct calculations from Eq. (13). We will assume that the excitation beam has a wavelength of 500 nanometers, and that the depletion beam has a wavelength of 525 nanometers, representing common peaks in the absorption and emission spectra of organic dyes in the visible region. Our key finding comes when we compare the effects of increasing the number of exposures and increasing the rate constant. Eq. (13) is messy to manipulate analytically, but it is clear that

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4

Fig. 3. Results of increasing the reaction rate or the number of exposures. All three concentration profiles are normalized so that a concentration of unity corresponds to a saturated surface with no molecules removed.

raising it to a positive integer exponent (due to multiple exposures with the same beam profile) can give an arbitrarily small value of φ g , while increasing kd arbitrarily cannot make φ g any smaller than 1 −

I e 1+ I e

exp(−σs I d (r )t ). Moreover, the incremental reduc-

tion in concentration due to multiplying kd by a scaling factor s is linear in s, but the effect of going from 1 exposure to s exposures is exponential in s. Note that we assume that all exposures are done by a lens focused on the same site for the duration of several consecutive pulses, without moving. Jittering can, of course, be an issue in scanning microscopes, and thus limit the resolution, but the situation we envision at least minimizes these issues somewhat because there is no motion of the lens between exposures. To get a sense of typical values, in Fig. 3 we consider the case I 1 = 1 (strong excitation) and I 2 = 8, for different numbers of exposures and values of kd τ . In all three cases shown, the concentration profile has a dip with a full width at half maximum (FWHM) of ≈ 50 nm (λ/10). If we first work with a weakly photoreactive species (kd τ = 0.1, i.e. reaction rate much slower than the decay of the excited state) only about 5% of the molecules are removed in a single cycle. Increasing kd τ to 1 (factor of 10 increase) results in the removal of 25% of the surface-bound molecules in a single step. On the other hand, if kd τ = 0.1 but the exposure process is repeated 10 times, 38% of the molecules are removed. Even larger disparities in favor of repeated exposure are found as the number of exposure cycles is increased. Because multiple exposures are likely to be almost trivial to implement, while the design of a more photoreactive species is likely to be a highly non-trivial task in synthetic chemistry, this fractionation effect is encouraging. Additionally, we considered the effects of exposing two nearby regions simultaneously with beams centered at two different points (Fig. 4). One might consider a scheme in which parallelism is achieved by sending light through a diffraction grating to produce multiple spots, which are then focused simultaneously. As in Fig. 3, we used the parameters I 1 = 1, I 2 = 8, and kd τ = 1. For beam separations of d = 500 nm (i.e. the excitation wavelength) the concentration profile has two distinct dips (top of Fig. 4), with 25% of the molecules removed at each spot. As the beam separation d decreases, the concentration dip (i.e. amount of molecules removed) does not change significantly, until approximately d = 0.6λ, where 21% of the molecules are removed (middle of Fig. 4). Interestingly, however, the region in which significant numbers of molecules are removed is slightly narrower. As the separation continues to decrease, when d = λ/2 (bottom of Fig. 4) the concentration dip is only half of its original value

Fig. 4. Results for performing simultaneous exposures at multiple sites with variable separations. Down to separations of ≈ 0.6λ the simultaneous exposures can be performed without any significant degradation of quality.

(12% of the molecules removed instead of 25%). Taken together, these results show that while the use of STED can enable optical monolayer patterning with feature sizes much smaller than the wavelength of light, the smallest possible distance between two features being printed simultaneously is approximately 0.6λ, comparable to the conventional diffraction limit. Thus, diffraction does not limit feature size, but it does limit the degree of parallelism possible in this scheme, by limiting the achievable distance between spots. 3. Diffusion of photoactivated species 3.1. Model and parameters The model described above is applicable to photoactivated molecules attaching to a surface from solution as long as the lifetime is sufficiently short that the molecules do not have enough time to diffuse outside of the initial activation region before returning to the ground state. Here we explore the effects of diffusion when the lifetime is long, to estimate how robust resolution is against changes in wavelength, initial concentration in solution, or surface reactivity. We will assume that excited (and hence reactive) molecules are initially present in solution at a concentration C s (r). The effect of the excitation and depletion beams is to confine the excited molecules to a region with a Gaussian profile centered at the coordinates (r , z) = (0, 0) (see Fig. 5). We approximate the initial concentration profile C s (the subscript s stands for “solution”) of excited molecules with: 2 2 2 C s (r, t = 0) = C 0 e −(r +z /4)/ R

(14)

where R is the (lateral) width (1/e 2 measure) of the Gaussian and the 1/4 coefficient on z2 reflects the fact that focused laser beams tend to be better localized along the lateral direction than the axial direction. We will denote the concentration of molecules attached to the surface as c ≡ c sat φ as above. We will assume that initially the surface has no molecules attached, so φ(r) = 0 at t = 0. In solution, the time dependence of the concentration profile of excited

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Table 1 Summary of dimensionless quantities. Name

Definition

Meaning

(r  , z )

(r / R , z/ R ) Dt / R 2 Dτ /R2

Radial and axial distances Time Lifetime of excited state Fraction of surface sites occupied Conc. of excited molecules in solution

t

τ φ

C s

C s R /c sat

k

C 0 R /c sat (c sat R / D )kon

C 0

Initial maximum concentration of excited molecules Rate constant for binding to surface

∂ R 2 c sat φ= kon C  (1 − φ) ≡ k C s (1 − φ)  ∂t D R ∂    2  C = ∇ C s − C s /τ  ∂t s where k ≡ given by: Fig. 5. Initial condition for binding of a diffusible, photoreactive molecule to a surface. The initial concentration profile is a Gaussian centered at (r = 0, z = 0). The reactive surface is at z = 0 and the boundaries of the window are at 10× the Gaussian’s 1/e 2 width R. The system is axisymmetric about the z axis.

Rc sat kon . D

(18) (19)

The boundary condition on C s at z = 0 is

∂  C = k C s (1 − φ) ∂ z s

(20)

Our dimensionless quantities are summarized in Table 1.

molecules is governed by diffusion and decay from the ground state, giving the following equation:

3.2. Results from model

∂ C s = D ∇ 2 C s − C s /τ ∂t

τ  1, the excited state decays before molecules can diffuse a dis-

As a first step, our model is easy to solve in the limit where

(15)

At the surface, the concentration of attached molecules is governed by second order kinetics, with a maximum surface concentration, giving the following time dependence:

∂ φ = kon C s (1 − φ) − koff φ ∂t

(16)

where 1 − φ is the fraction of sites unoccupied. These equations for the time evolution of φ and C s must be supplemented by boundary conditions. We assume that this reaction happens in a large cylindrical container, and we impose noflux conditions at the radial edge and at the top surface (r = 10R and z = 10R in our simulations). At the reaction surface (z = 0) we impose the condition that the flux of molecules from solution onto the surface (given by Fick’s Law) be equal to the rate at which molecules accumulate on the surface:

D

∂ ∂ C s = c sat φ = kon c sat C s (1 − φ) − c sat koff φ ∂z ∂t

(17)

We will assume that the molecules are tightly bound to the surface (i.e. binding energy k B T ) so that koff ≈ 0 and the off rate will be ignored hereafter. To non-dimensionalize the equations, we will measure distances in units of the Gaussian concentration profile’s 1/e 2 width R (50 nanometers or smaller is likely to be typical) and times in units of the diffusion time scale R 2 / D. For typical D values of 10−9 m2 /s or smaller [15], our diffusion time scale will be of order 10−7 seconds or longer. Concentrations will be measured in units of c sat / R where c sat (not to be confused with capital C 0 ) is the density of binding sites on the surface and will typically be of order 1 per square nanometer, giving a value of c sat / R ≈ 1026 m−3 or 3 × 10−2 moles per liter. For convenience we define rescaled distances (r  , z ) ≡ (r / R , z/ R ), rescaled time variables t  ≡ t D / R 2 and τ  = τ D / R 2 , and solution concentrations C s ≡ C s R /c sat and C 0 ≡ C 0 R /c sat . Since we have defined surface concentrations as c sat φ we already have a dimensionless variable to work with for surface concentration. Together, we get the following equations for the time dependences of φ and C s :

tance comparable to the 1/e 2 width R of the initial concentration profile, and the time dependence of the concentration in solution is just an exponential decay. If the total amount of molecules deposited is also small, then the (1 − φ) term in Eq. (18) and Eq. (19) does not change significantly during the lifetime of the excited state, and so the final surface concentration is:

∞ φ(r) =



C s (t = 0)e −t dt  = C s (t = 0)k τ 

(21)

0

In this case, the concentration profile on the surface is directly proportional to the local concentration profile in solution. The 1/e 2 width of the surface profile is hence equal to the width of the initial concentration profile in solution, and so nanoscale resolution on the surface is easy to obtain if the initial concentration profile in solution has a narrow width due to the use of stimulated emission depletion. However, if either condition is violated, so that τ   1 and/or φ 0.1–1 after the excited state has decayed, then the width of the surface concentration profile may be greater than the width in solution, reducing the resolution. In the case of long-lived species, the reduction in resolution comes from diffusion of the soluble species, increasing the width of the concentration profile in solution over time. In the case of large surface concentrations, saturation effects will cause the deposition rate to drop near the center of the profile while remaining steady near the edges, broadening the profile. To determine the magnitude of these effects, we conducted simulations of a “worst case scenario”: We first determined the necessary volume concentration (i.e. value of C 0 ) so that the peak concentration on the surface is φ = 0.5, for a range of different lifetimes τ  and reaction rates k . We then determine the surface concentration profile’s full width at half maximum (FWHM) under those conditions. Simulations were performed in COMSOL Multiphysics, using the Chemical Engineering module in axisymmetric mode. The boundaries of the computational window were given by 0  r  , z  10 (see Fig. 5). The mesh comprised 18,021 elements, with a higher density near the z = 0 surface where the reaction occurs.

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Fig. 7. FWHM of surface concentration profile for different excited state lifetimes and reactivities.

4. Conclusions

Fig. 6. Concentration of reagent in solution required to achieve a peak surface coverage of φ = 50% for different excited state lifetimes and reaction rates.

As shown in Fig. 6, the concentration required to achieve a maximum of 50% surface coverage decreases (not surprisingly) as the reaction rate increases. For long lifetimes (relative to the characteristic diffusion timescale R 2 / D) the required concentration is largely independent of the excited state lifetime, as after a time of order R 2 / D most of the excited molecules have diffused away from the surface. The most important point is that if the reaction rate constant k is small (< 1), so that the characteristic reaction time is longer than the characteristic diffusion time, highly concentrated solutions C 0 > 102 are required. Since a value of C 0 = 1 corresponds to approximately 3 × 10−2 M, values of C 0 larger than 100 are unrealistic in most cases. This does not rule out the feasibility of working with weakly reactive species, as the logic of using multiple cycles (as above) still applies. Interestingly, due to the effect of surface binding on the concentration profile in solution and the non-linearity of Eq. (18) and Eq. (19), the required concentration is not directly proportional to the inverse of the rate constant k , although it does decrease as k increases. With those required concentrations established for different excited state lifetimes and reaction rate constants, we next examine the FWHM of the surface concentration profiles. (We used FWHM rather than 1/e 2 with simulation data because it is easy to infer from a visual examination of a graph.) As shown in Fig. 7, the FWHM of the surface concentration profile (normalized to R, the 1/e 2 width of the initial Gaussian profile of molecules in solution) is quite robust against large changes in excited state lifetime and reactivity. In the ideal case, where the profile on the surface matches the initial Gaussian profile in solution, the FWHM would  2 2 be log 2R = 0.833R (from the condition e −r / R = 0.5). For short excited state lifetimes (less than the characteristic diffusion time) the FWHM is close to this value (within 25%), because most of the attachment to the surface happens before the profile of the excited molecules in solution can be broadened by diffusion. Even for excited state lifetimes two orders of magnitude longer than the diffusion time scale, however, the width FWHM is only about twice the ideal value. The key reason for this is that at long times most of the excited molecules have diffused away from the surface. We therefore conclude that while diffusion effects may pose problems for attaching large numbers of molecules to the surface, they will not significantly broaden the surface concentration profile.

In conclusion, we have formulated theoretical models of optically-controlled patterning of monolayers via STimulated Emission Depletion in two different scenarios: Excitation of a surface-bound species for either selective removal or attachment to a soluble species, and excitation of a soluble species that attaches to a surface while in its excited state. Achieving significant attachment of a soluble species during its excited state lifetime is likely to require either very fast reaction rates or very high concentrations, due to the diffusion timescale being so short (≈ 10−7 seconds). However, diffusion effects do not significantly impair resolution, and repeated cycles of exposure and reaction can be used to accumulate molecules on a surface with very high spatial resolution. Moreover, reactions involving an excited species that is already bound to the surface can also lead to surface patterning with very high resolution, but this concept faces no constraints due to diffusion. One promising way of realizing this concept is with a reaction in which an excited surface-bound species (e.g. a metastable structural isomer) binds a diffusible molecule while in its excited state; due to the potentially long lifetimes of such molecules, significant attachment could be realized in a single cycle of activation and reaction. An additional benefit of working with surface-bound excited species is that repeated exposure has an exponential effect on the number of unreacted molecules remaining on the surface, while increasing the rate constant has only a linear effect. Because increasing the number of exposures is almost trivial (requiring multiple laser pulses, provided that the point of focus is stable throughout the process) and does not require the trial and error of synthesizing a photoreactive molecule with a larger rate constant, there is great promise for patterning surface-bound molecules via STED. References [1] A.N. Boto, P. Kok, D.S. Abrams, S.L. Braunstein, C.P. Williams, J.P. Dowling, Phys. Rev. Lett. 85 (13) (2000) 2733. [2] M. Kiffner, J. Evers, M.S. Zubairy, Phys. Rev. Lett. 100 (7) (2008) 73602. [3] N. Fang, H. Lee, C. Sun, X. Zhang, Science 308 (5721) (2005) 534. [4] H. Li, V.A. Sautenkov, M.M. Kash, A.V. Sokolov, G.R. Welch, Y.V. Rostovtsev, M.S. Zubairy, M.O. Scully, Phys. Rev. A 78 (1) (2008) 13803. [5] V. Westphal, S.W. Hell, Phys. Rev. Lett. 94 (14) (2005) 143903. [6] V. Westphal, S.O. Rizzoli, M.A. Lauterbach, D. Kamin, R. Jahn, S.W. Hell, Science 320 (5976) (2008) 246. [7] S.W. Hell, Phys. Lett. A 326 (1–2) (2004) 140. [8] L. Li, R.R. Gattass, E. Gershgoren, H. Hwang, J.T. Fourkas, Science 324 (5929) (2009) 910.

Please cite this article in press as: T. Nguyen et al., Physics Letters A (2010), doi:10.1016/j.physleta.2010.04.038

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[9] T.F. Scott, B.A. Kowalski, A.C. Sullivan, C.N. Bowman, R.R. McLeod, Science 324 (5929) (2009) 913. [10] T.L. Andrew, H.Y. Tsai, R. Menon, Science 324 (5929) (2009) 917. [11] F. Gai, K.C. Hasson, J.C. McDonald, P.A. Anfinrud, Science 279 (5358) (1998) 1886. [12] H. Kandori, Y. Shichida, T. Yoshizawa, Biochemistry (Moscow) 66 (11) (2001) 1197.

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[13] Y. Kim, J.A. Phillips, H. Liu, H. Kang, W. Tan, Proc. Nat. Acad. Sci. 106 (16) (2009) 6489. [14] R.H. El Halabieh, O. Mermut, C.J. Barrett, Pure Appl. Chem. 76 (7–8) (2004) 1445. [15] E.L. Cussler, Diffusion: Mass Transfer in Fluid Systems, Cambridge Univ. Press, 1997. [16] N.J. Turro, Modern Molecular Photochemistry, Univ. Science Books, 1991.

Please cite this article in press as: T. Nguyen et al., Physics Letters A (2010), doi:10.1016/j.physleta.2010.04.038

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