Last login: Mon Mar 23 12:26:18 on ttys000 iMac-di-Alberto:~ Alberto$ sudo xcode-select --install Password: xcode-select: error: command line tools are already installed, use "Software Upd ate" to install updates iMac-di-Alberto:~ Alberto$ sudo xcode-select update xcode-select: error: invalid argument 'update' Usage: xcode-select [options] Print or change the path to the active developer directory. This directory controls which tools are used for the Xcode command line tools (for example, xcodebuild) as well as the BSD development commands (such as cc and make). Options: -h, --help print this help message and exit -p, --print-path print the path of the active developer directory -s , --switch set the path for the active developer directory --install open a dialog for installation of the command line developer tools -v, --version print the xcode-select version -r, --reset reset to the default command line tools path iMac-di-Alberto:~ Alberto$ sudo xcodebild -license sudo: xcodebild: command not found iMac-di-Alberto:~ Alberto$ sudo xcodebuild -license

You have not agreed to the Xcode license agreements. You must agree to both lice nse agreements below in order to use Xcode. Hit the Enter key to view the license agreements at '/Applications/Xcode.app/Con tents/Resources/English.lproj/License.rtf' IMPORTANT: BY USING THIS SOFTWARE, YOU ARE AGREEING TO BE BOUND BY THE FOLLOWING APPLE TERMS: A. MAC SDK AND XCODE AGREEMENT B. iOS SDK AGREEMENT APPLE INC. MAC SDK AND XCODE AGREEMENT PLEASE READ THIS MAC SDK AND XCODE AGREEMENT ("LICENSE") CAREFULLY BEFORE USING THE DEVELOPER SOFTWARE (DEFINED BELOW). BY USING THE DEVELOPER SOFTWARE, YOU ARE AGREEING TO BE BOUND BY THE TERMS OF THIS LICENSE. IF YOU ARE ACCESSING THE DE VELOPER SOFTWARE ELECTRONICALLY, SIGNIFY YOUR AGREEMENT TO BE BOUND BY THE TERMS OF THIS LICENSE BY CLICKING THE "AGREE " BUTTON. IF YOU DO NOT AGREE TO THE TE RMS OF THIS LICENSE, DO NOT USE THE DEVELOPER SOFTWARE AND CLICK “DISAGREE”. IMPORTANT NOTE: To the extent that this software may be used to reproduce materi als, it is licensed to you only for reproduction of non-copyrighted materials, m aterials in which you own the copyright, or materials you are authorized or lega lly permitted to reproduce. If you are uncertain about your right to copy any ma terial, you should contact your legal advisor. 1. General.

By typing 'agree' you are agreeing to the terms of the software license agreemen

ts. Type 'print' to print them or anything else to cancel, [agree, print, cancel ] agree You can view the license agreements in Xcode's About Box, or at /Applications/Xc ode.app/Contents/Resources/English.lproj/License.rtf iMac-di-Alberto:~ Alberto$ ruby -e "$(curl -fsSL https://raw.githubusercontent.c om/Homebrew/install/master/install)" ==> This script will install: /usr/local/bin/brew /usr/local/Library/... /usr/local/share/man/man1/brew.1 ==> The following directories will be made group writable: /usr/local/. /usr/local/bin /usr/local/share /usr/local/share/man /usr/local/share/man/man1 ==> The following directories will have their group set to admin: /usr/local/. /usr/local/bin /usr/local/share /usr/local/share/man /usr/local/share/man/man1 Press RETURN to continue or any other key to abort ==> /usr/bin/sudo /bin/chmod g+rwx /usr/local/. /usr/local/bin /usr/local/share /usr/local/share/man /usr/local/share/man/man1 ==> /usr/bin/sudo /usr/bin/chgrp admin /usr/local/. /usr/local/bin /usr/local/sh are /usr/local/share/man /usr/local/share/man/man1 ==> /usr/bin/sudo /bin/mkdir /Library/Caches/Homebrew ==> /usr/bin/sudo /bin/chmod g+rwx /Library/Caches/Homebrew ==> Downloading and installing Homebrew... remote: Counting objects: 238563, done. remote: Compressing objects: 100% (2169/2169), done. remote: Total 238563 (delta 1510), reused 0 (delta 0), pack-reused 236391 Receiving objects: 100% (238563/238563), 32.88 MiB | 966.00 KiB/s, done. Resolving deltas: 100% (177457/177457), done. From https://github.com/Homebrew/homebrew * [new branch] master -> origin/master HEAD is now at 4856831 test-bot: uninstall build deps before bottle test. ==> Installation successful! ==> Next steps Run `brew doctor` before you install anything Run `brew help` to get started iMac-di-Alberto:~ Alberto$ brew doctor Please note that these warnings are just used to help the Homebrew maintainers with debugging if you file an issue. If everything you use Homebrew for is working fine: please don't worry and just ignore them. Thanks! Warning: Some directories in /usr/local/share/man aren't writable. This can happen if you "sudo make install" software that isn't managed by Homebrew. If a brew tries to add locale information to one of these directories, then the install will fail during the link step. You should probably `chown` them: /usr/local/share/man/de /usr/local/share/man/de/man1

Warning: Your XQuartz (2.7.5) is outdated Please install XQuartz 2.7.7: https://xquartz.macosforge.org iMac-di-Alberto:~ Alberto$ brew tap homebrew/science Cloning into '/usr/local/Library/Taps/homebrew/homebrew-science'... remote: Counting objects: 9424, done. remote: Total 9424 (delta 0), reused 0 (delta 0), pack-reused 9424 Receiving objects: 100% (9424/9424), 2.52 MiB | 704.00 KiB/s, done. Resolving deltas: 100% (5268/5268), done. Checking connectivity... done. Tapped 447 formulae iMac-di-Alberto:~ Alberto$ brew update Already up-to-date. iMac-di-Alberto:~ Alberto$ brew install python scons sundials ==> Installing dependencies for python: readline, sqlite, gdbm, openssl ==> Installing python dependency: readline ==> Downloading https://homebrew.bintray.com/bottles/readline-6.3.8.yosemite.bot ######################################################################## 100,0% ==> Pouring readline-6.3.8.yosemite.bottle.tar.gz ==> Caveats This formula is keg-only, which means it was not symlinked into /usr/local. Mac OS X provides similar software, and installing this software in parallel can cause all kinds of trouble. OS X provides the BSD libedit library, which shadows libreadline. In order to prevent conflicts when programs look for libreadline we are defaulting this GNU Readline installation to keg-only. Generally there are no consequences of this for you. If you build your own software and it requires this formula, you'll need to add to your build variables: LDFLAGS: -L/usr/local/opt/readline/lib CPPFLAGS: -I/usr/local/opt/readline/include ==> Summary 🍺 /usr/local/Cellar/readline/6.3.8: 40 files, 2,1M ==> Installing python dependency: sqlite ==> Downloading https://homebrew.bintray.com/bottles/sqlite-3.8.8.3.yosemite.bot ######################################################################## 100,0% ==> Pouring sqlite-3.8.8.3.yosemite.bottle.tar.gz ==> Caveats This formula is keg-only, which means it was not symlinked into /usr/local. Mac OS X already provides this software and installing another version in parallel can cause all kinds of trouble. OS X provides an older sqlite3. Generally there are no consequences of this for you. If you build your own software and it requires this formula, you'll need to add to your build variables: LDFLAGS: -L/usr/local/opt/sqlite/lib CPPFLAGS: -I/usr/local/opt/sqlite/include

==> Summary 🍺 /usr/local/Cellar/sqlite/3.8.8.3: 9 files, 2,1M ==> Installing python dependency: gdbm ==> Downloading https://homebrew.bintray.com/bottles/gdbm-1.11.yosemite.bottle.2 ######################################################################## 100,0% ==> Pouring gdbm-1.11.yosemite.bottle.2.tar.gz 🍺 /usr/local/Cellar/gdbm/1.11: 17 files, 532K ==> Installing python dependency: openssl ==> Downloading https://homebrew.bintray.com/bottles/openssl-1.0.2a-1.yosemite.b ######################################################################## 100,0% ==> Pouring openssl-1.0.2a-1.yosemite.bottle.tar.gz ==> Caveats A CA file has been bootstrapped using certificates from the system keychain. To add additional certificates, place .pem files in /usr/local/etc/openssl/certs and run /usr/local/opt/openssl/bin/c_rehash This formula is keg-only, which means it was not symlinked into /usr/local. Mac OS X already provides this software and installing another version in parallel can cause all kinds of trouble. Apple has deprecated use of OpenSSL in favor of its own TLS and crypto libraries Generally there are no consequences of this for you. If you build your own software and it requires this formula, you'll need to add to your build variables: LDFLAGS: -L/usr/local/opt/openssl/lib CPPFLAGS: -I/usr/local/opt/openssl/include ==> Summary 🍺 /usr/local/Cellar/openssl/1.0.2a-1: 463 files, 18M ==> Installing python ==> Downloading https://homebrew.bintray.com/bottles/python-2.7.9.yosemite.bottl ######################################################################## 100,0% ==> Pouring python-2.7.9.yosemite.bottle.10.tar.gz ==> Caveats Pip and setuptools have been installed. To update them pip install --upgrade pip setuptools You can install Python packages with pip install They will install into the site-package directory /usr/local/lib/python2.7/site-packages See: https://github.com/Homebrew/homebrew/blob/master/share/doc/homebrew/Homebre w-and-Python.md .app bundles were installed. Run `brew linkapps python` to symlink these to /Applications. ==> /usr/local/Cellar/python/2.7.9/bin/python -s setup.py --no-user-cfg install ==> /usr/local/Cellar/python/2.7.9/bin/python -s setup.py --no-user-cfg install ==> Summary 🍺 /usr/local/Cellar/python/2.7.9: 4810 files, 78M

==> Downloading https://homebrew.bintray.com/bottles/scons-2.3.4.yosemite.bottle ######################################################################## 100,0% ==> Pouring scons-2.3.4.yosemite.bottle.1.tar.gz 🍺 /usr/local/Cellar/scons/2.3.4: 208 files, 2,5M ==> Installing sundials from homebrew/homebrew-science ==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/science/sun ######################################################################## 100,0% ==> Pouring sundials-2.5.0.yosemite.bottle.tar.gz 🍺 /usr/local/Cellar/sundials/2.5.0: 187 files, 3,9M iMac-di-Alberto:~ Alberto$ which python /usr/local/bin/python iMac-di-Alberto:~ Alberto$ pip install cython numpy Collecting cython Downloading Cython-0.22-cp27-none-macosx_10_6_intel.macosx_10_9_intel.macosx_1 0_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (3.7MB) 100% |################################| 3.7MB 139kB/s Collecting numpy Downloading numpy-1.9.2-cp27-none-macosx_10_6_intel.macosx_10_9_intel.macosx_1 0_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (3.7MB) 100% |################################| 3.7MB 137kB/s Installing collected packages: numpy, cython

Successfully installed cython-0.22 numpy-1.9.2 iMac-di-Alberto:~ Alberto$ brew install python3 ==> Installing python3 dependency: xz ==> Downloading https://homebrew.bintray.com/bottles/xz-5.2.1.yosemite.bottle.ta ######################################################################## 100,0% ==> Pouring xz-5.2.1.yosemite.bottle.tar.gz 🍺 /usr/local/Cellar/xz/5.2.1: 59 files, 1,7M ==> Installing python3 ==> Downloading https://homebrew.bintray.com/bottles/python3-3.4.3.yosemite.bott ######################################################################## 100,0% ==> Pouring python3-3.4.3.yosemite.bottle.tar.gz ==> Caveats Pip and setuptools have been installed. To update them pip3 install --upgrade pip setuptools You can install Python packages with pip3 install They will install into the site-package directory /usr/local/lib/python3.4/site-packages See: https://github.com/Homebrew/homebrew/blob/master/share/doc/homebrew/Homebre w-and-Python.md .app bundles were installed. Run `brew linkapps python3` to symlink these to /Applications. ==> /usr/local/Cellar/python3/3.4.3/bin/python3 -s setup.py --no-user-cfg instal ==> /usr/local/Cellar/python3/3.4.3/bin/python3 -s setup.py --no-user-cfg instal ==> Summary 🍺 /usr/local/Cellar/python3/3.4.3: 4647 files, 81M iMac-di-Alberto:~ Alberto$ pip3 install numpy cython Collecting numpy Downloading numpy-1.9.2-cp34-cp34m-macosx_10_6_intel.macosx_10_9_intel.macosx_ 10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (3.7MB) 100% |################################| 3.7MB 145kB/s

Collecting cython Downloading Cython-0.22-cp34-cp34m-macosx_10_6_intel.macosx_10_9_intel.macosx_ 10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (4.4MB) 100% |################################| 4.4MB 129kB/s Installing collected packages: cython, numpy

Successfully installed cython-0.22 numpy-1.9.2 iMac-di-Alberto:~ Alberto$ brew install cantera --devel --with-matlab=/Applicati ons/MATLAB_R2013a.app/ Error: No devel block is defined for cantera iMac-di-Alberto:~ Alberto$ brew install cantera --HEAD --with-matlab=/Applicatio ns/MATLAB_R2013a.app/ ==> Installing cantera from homebrew/homebrew-science ==> Cloning https://github.com/cantera/cantera.git Cloning into '/Library/Caches/Homebrew/cantera--git'... remote: Counting objects: 2153, done. remote: Compressing objects: 100% (1812/1812), done. remote: Total 2153 (delta 374), reused 1280 (delta 303), pack-reused 0 Receiving objects: 100% (2153/2153), 3.93 MiB | 778.00 KiB/s, done. Resolving deltas: 100% (374/374), done. Checking connectivity... done. ==> Checking out branch master ==> /usr/local/opt/scons/bin/scons build prefix=/usr/local/Cellar/cantera/HEAD p ==> /usr/local/opt/scons/bin/scons test - runCanteraTests.m.passed ***************************** scons: *** [test_problems/finish_tests] One or more tests failed. scons: building terminated because of errors. READ THIS: https://git.io/brew-troubleshooting If reporting this issue please do so at (not Homebrew/homebrew): https://github.com/homebrew/homebrew-science/issues iMac-di-Alberto:~ Alberto$ brew linkapps python Linking /usr/local/opt/python/IDLE.app Linking /usr/local/opt/python/Python Launcher.app Finished linking. Find the links under /Applications. iMac-di-Alberto:~ Alberto$ pip install --upgrade pip setuptools Requirement already up-to-date: pip in /usr/local/lib/python2.7/site-packages/pi p-6.0.8-py2.7.egg Collecting setuptools from https://pypi.python.org/packages/3.4/s/setuptools/set uptools-14.3.1-py2.py3-none-any.whl#md5=a354fbc488780c81159ef6ef40206743 Downloading setuptools-14.3.1-py2.py3-none-any.whl (501kB) 100% |################################| 503kB 296kB/s Installing collected packages: setuptools Found existing installation: setuptools 12.0.5 Uninstalling setuptools-12.0.5: Successfully uninstalled setuptools-12.0.5 Successfully installed setuptools iMac-di-Alberto:~ Alberto$ pip install -bash: syntax error near unexpected token `newline' iMac-di-Alberto:~ Alberto$ brew linkapps python3 Linking /usr/local/opt/python3/IDLE 3.app Linking /usr/local/opt/python3/Python Launcher 3.app Finished linking. Find the links under /Applications.

iMac-di-Alberto:~ Alberto$ brew install cantera --HEAD --with-matlab=/Applicatio ns/MATLAB_R2013a.app/ ==> Installing cantera from homebrew/homebrew-science ==> Cloning https://github.com/cantera/cantera.git Updating /Library/Caches/Homebrew/cantera--git ==> Checking out branch master ==> /usr/local/opt/scons/bin/scons build prefix=/usr/local/Cellar/cantera/HEAD p ==> /usr/local/opt/scons/bin/scons test - runCanteraTests.m.passed ***************************** scons: *** [test_problems/finish_tests] One or more tests failed. scons: building terminated because of errors. READ THIS: https://git.io/brew-troubleshooting If reporting this issue please do so at (not Homebrew/homebrew): https://github.com/homebrew/homebrew-science/issues iMac-di-Alberto:~ Alberto$ ls Applications Applications (Parallels) Desktop Documents Downloads Dropbox Google Drive iMac-di-Alberto:~ Alberto$

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